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1.

Combinatorial, additive and dose-dependent drug-microbiome associations.

Forslund, Sofia K; Chakaroun, Rima; Zimmermann-Kogadeeva, Maria; Markó, Lajos; Aron-Wisnewsky, Judith; Nielsen, Trine; Moitinho-Silva, Lucas; Schmidt, Thomas S B; Falony, Gwen; Vieira-Silva, Sara; Adriouch, Solia; Alves, Renato J; Assmann, Karen; Bastard, Jean-Philippe; Birkner, Till; Caesar, Robert; Chilloux, Julien; Coelho, Luis Pedro; Fezeu, Leopold; Galleron, Nathalie; Helft, Gerard; Isnard, Richard; Ji, Boyang; Kuhn, Michael; Le Chatelier, Emmanuelle; Myridakis, Antonis; Olsson, Lisa; Pons, Nicolas; Prifti, Edi; Quinquis, Benoit; Roume, Hugo; Salem, Joe-Elie; Sokolovska, Nataliya; Tremaroli, Valentina; Valles-Colomer, Mireia; Lewinter, Christian; Søndertoft, Nadja B; Pedersen, Helle Krogh; Hansen, Tue H; Gøtze, Jens Peter; Køber, Lars; Vestergaard, Henrik; Hansen, Torben; Zucker, Jean-Daniel; Hercberg, Serge; Oppert, Jean-Michel; Letunic, Ivica; Nielsen, Jens; Bäckhed, Fredrik; Ehrlich, S Dusko.

Nature; 600(7889): 500-505, 2021 12.

Artículo en Inglés | MEDLINE | ID: mdl-34880489

2.

Statin therapy is associated with lower prevalence of gut microbiota dysbiosis.

Vieira-Silva, Sara; Falony, Gwen; Belda, Eugeni; Nielsen, Trine; Aron-Wisnewsky, Judith; Chakaroun, Rima; Forslund, Sofia K; Assmann, Karen; Valles-Colomer, Mireia; Nguyen, Thi Thuy Duyen; Proost, Sebastian; Prifti, Edi; Tremaroli, Valentina; Pons, Nicolas; Le Chatelier, Emmanuelle; Andreelli, Fabrizio; Bastard, Jean-Phillippe; Coelho, Luis Pedro; Galleron, Nathalie; Hansen, Tue H; Hulot, Jean-Sébastien; Lewinter, Christian; Pedersen, Helle K; Quinquis, Benoit; Rouault, Christine; Roume, Hugo; Salem, Joe-Elie; Søndertoft, Nadja B; Touch, Sothea; Dumas, Marc-Emmanuel; Ehrlich, Stanislav Dusko; Galan, Pilar; Gøtze, Jens P; Hansen, Torben; Holst, Jens J; Køber, Lars; Letunic, Ivica; Nielsen, Jens; Oppert, Jean-Michel; Stumvoll, Michael; Vestergaard, Henrik; Zucker, Jean-Daniel; Bork, Peer; Pedersen, Oluf; Bäckhed, Fredrik; Clément, Karine; Raes, Jeroen.

Nature; 581(7808): 310-315, 2020 05.

Artículo en Inglés | MEDLINE | ID: mdl-32433607

3.

Cardiomuscular Biomarkers in the Diagnosis and Prognostication of Immune Checkpoint Inhibitor Myocarditis.

Lehmann, Lorenz H; Heckmann, Markus B; Bailly, Guillaume; Finke, Daniel; Procureur, Adrien; Power, John R; Stein, Frederic; Bretagne, Marie; Ederhy, Stephane; Fenioux, Charlotte; Hamwy, Omar; Funck-Brentano, Elisa; Romano, Emanuela; Pieroni, Laurence; Münster, Jan P; Allenbach, Yves; Anquetil, Céline; Leonard-Louis, Sarah; Palaskas, Nicolas L; Hayek, Salim S; Katus, Hugo A; Giannitsis, Evangelos; Frey, Norbert; Kaya, Ziya; Moslehi, Javid; Prifti, Edi; Salem, Joe-Elie.

Circulation; 148(6): 473-486, 2023 08 08.

Artículo en Inglés | MEDLINE | ID: mdl-37317858

4.

Automatic digitization of paper electrocardiograms - A systematic review.

Lence, Alex; Extramiana, Fabrice; Fall, Ahmad; Salem, Joe-Elie; Zucker, Jean-Daniel; Prifti, Edi.

J Electrocardiol; 80: 125-132, 2023.

Artículo en Inglés | MEDLINE | ID: mdl-37352634

5.

Impairment of gut microbial biotin metabolism and host biotin status in severe obesity: effect of biotin and prebiotic supplementation on improved metabolism.

Belda, Eugeni; Voland, Lise; Tremaroli, Valentina; Falony, Gwen; Adriouch, Solia; Assmann, Karen E; Prifti, Edi; Aron-Wisnewsky, Judith; Debédat, Jean; Le Roy, Tiphaine; Nielsen, Trine; Amouyal, Chloé; André, Sébastien; Andreelli, Fabrizio; Blüher, Matthias; Chakaroun, Rima; Chilloux, Julien; Coelho, Luis Pedro; Dao, Maria Carlota; Das, Promi; Fellahi, Soraya; Forslund, Sofia; Galleron, Nathalie; Hansen, Tue H; Holmes, Bridget; Ji, Boyang; Krogh Pedersen, Helle; Le, Phuong; Le Chatelier, Emmanuelle; Lewinter, Christian; Mannerås-Holm, Louise; Marquet, Florian; Myridakis, Antonis; Pelloux, Veronique; Pons, Nicolas; Quinquis, Benoit; Rouault, Christine; Roume, Hugo; Salem, Joe-Elie; Sokolovska, Nataliya; Søndertoft, Nadja B; Touch, Sothea; Vieira-Silva, Sara; Galan, Pilar; Holst, Jens; Gøtze, Jens Peter; Køber, Lars; Vestergaard, Henrik; Hansen, Torben; Hercberg, Serge.

Gut; 71(12): 2463-2480, 2022 12.

Artículo en Inglés | MEDLINE | ID: mdl-35017197

6.

Human gut microbes impact host serum metabolome and insulin sensitivity.

Pedersen, Helle Krogh; Gudmundsdottir, Valborg; Nielsen, Henrik Bjørn; Hyotylainen, Tuulia; Nielsen, Trine; Jensen, Benjamin A H; Forslund, Kristoffer; Hildebrand, Falk; Prifti, Edi; Falony, Gwen; Le Chatelier, Emmanuelle; Levenez, Florence; Doré, Joel; Mattila, Ismo; Plichta, Damian R; Pöhö, Päivi; Hellgren, Lars I; Arumugam, Manimozhiyan; Sunagawa, Shinichi; Vieira-Silva, Sara; Jørgensen, Torben; Holm, Jacob Bak; Trost, Kajetan; Kristiansen, Karsten; Brix, Susanne; Raes, Jeroen; Wang, Jun; Hansen, Torben; Bork, Peer; Brunak, Søren; Oresic, Matej; Ehrlich, S Dusko; Pedersen, Oluf.

Nature; 535(7612): 376-81, 2016 07 21.

Artículo en Inglés | MEDLINE | ID: mdl-27409811

7.

Deep learning analysis of electrocardiogram for risk prediction of drug-induced arrhythmias and diagnosis of long QT syndrome.

Prifti, Edi; Fall, Ahmad; Davogustto, Giovanni; Pulini, Alfredo; Denjoy, Isabelle; Funck-Brentano, Christian; Khan, Yasmin; Durand-Salmon, Alexandre; Badilini, Fabio; Wells, Quinn S; Leenhardt, Antoine; Zucker, Jean-Daniel; Roden, Dan M; Extramiana, Fabrice; Salem, Joe-Elie.

Eur Heart J; 42(38): 3948-3961, 2021 10 07.

Artículo en Inglés | MEDLINE | ID: mdl-34468739

8.

Intestinal alteration of α-gustducin and sweet taste signaling pathway in metabolic diseases is partly rescued after weight loss and diabetes remission.

Le Gléau, Léa; Rouault, Christine; Osinski, Céline; Prifti, Edi; Soula, Hédi Antoine; Debédat, Jean; Busieau, Pauline; Amouyal, Chloé; Clément, Karine; Andreelli, Fabrizio; Ribeiro, Agnès; Serradas, Patricia.

Am J Physiol Endocrinol Metab; 321(3): E417-E432, 2021 09 01.

Artículo en Inglés | MEDLINE | ID: mdl-34338041

9.

Disentangling type 2 diabetes and metformin treatment signatures in the human gut microbiota.

Forslund, Kristoffer; Hildebrand, Falk; Nielsen, Trine; Falony, Gwen; Le Chatelier, Emmanuelle; Sunagawa, Shinichi; Prifti, Edi; Vieira-Silva, Sara; Gudmundsdottir, Valborg; Pedersen, Helle K; Arumugam, Manimozhiyan; Kristiansen, Karsten; Voigt, Anita Yvonne; Vestergaard, Henrik; Hercog, Rajna; Costea, Paul Igor; Kultima, Jens Roat; Li, Junhua; Jørgensen, Torben; Levenez, Florence; Dore, Joël; Nielsen, H Bjørn; Brunak, Søren; Raes, Jeroen; Hansen, Torben; Wang, Jun; Ehrlich, S Dusko; Bork, Peer; Pedersen, Oluf.

Nature; 528(7581): 262-266, 2015 Dec 10.

Artículo en Inglés | MEDLINE | ID: mdl-26633628

10.

Phosphatidylglycerols are induced by gut dysbiosis and inflammation, and favorably modulate adipose tissue remodeling in obesity.

Kayser, Brandon D; Lhomme, Marie; Prifti, Edi; Da Cunha, Carla; Marquet, Florian; Chain, Florian; Naas, Isabelle; Pelloux, Véronique; Dao, Maria-Carlota; Kontush, Anatol; Rizkalla, Salwa W; Aron-Wisnewsky, Judith; Bermúdez-Humarán, Luis G; Oakley, Fiona; Langella, Philippe; Clément, Karine; Dugail, Isabelle.

FASEB J; 33(4): 4741-4754, 2019 04.

Artículo en Inglés | MEDLINE | ID: mdl-30608881

11.

Alterations of the human gut microbiome in liver cirrhosis.

Qin, Nan; Yang, Fengling; Li, Ang; Prifti, Edi; Chen, Yanfei; Shao, Li; Guo, Jing; Le Chatelier, Emmanuelle; Yao, Jian; Wu, Lingjiao; Zhou, Jiawei; Ni, Shujun; Liu, Lin; Pons, Nicolas; Batto, Jean Michel; Kennedy, Sean P; Leonard, Pierre; Yuan, Chunhui; Ding, Wenchao; Chen, Yuanting; Hu, Xinjun; Zheng, Beiwen; Qian, Guirong; Xu, Wei; Ehrlich, S Dusko; Zheng, Shusen; Li, Lanjuan.

Nature; 513(7516): 59-64, 2014 Sep 04.

Artículo en Inglés | MEDLINE | ID: mdl-25079328

12.

Major microbiota dysbiosis in severe obesity: fate after bariatric surgery.

Aron-Wisnewsky, Judith; Prifti, Edi; Belda, Eugeni; Ichou, Farid; Kayser, Brandon D; Dao, Maria Carlota; Verger, Eric O; Hedjazi, Lyamine; Bouillot, Jean-Luc; Chevallier, Jean-Marc; Pons, Nicolas; Le Chatelier, Emmanuelle; Levenez, Florence; Ehrlich, Stanislav Dusko; Dore, Joel; Zucker, Jean-Daniel; Clément, Karine.

Gut; 68(1): 70-82, 2019 01.

Artículo en Inglés | MEDLINE | ID: mdl-29899081

13.

Akkermansia muciniphila abundance is lower in severe obesity, but its increased level after bariatric surgery is not associated with metabolic health improvement.

Dao, Maria Carlota; Belda, Eugeni; Prifti, Edi; Everard, Amandine; Kayser, Brandon D; Bouillot, Jean-Luc; Chevallier, Jean-Marc; Pons, Nicolas; Le Chatelier, Emmanuelle; Ehrlich, Stanislav Dusko; Doré, Joel; Aron-Wisnewsky, Judith; Zucker, Jean-Daniel; Cani, Patrice D; Clément, Karine.

Am J Physiol Endocrinol Metab; 317(3): E446-E459, 2019 09 01.

Artículo en Inglés | MEDLINE | ID: mdl-31265324

14.

Elevated serum ceramides are linked with obesity-associated gut dysbiosis and impaired glucose metabolism.

Kayser, Brandon D; Prifti, Edi; Lhomme, Marie; Belda, Eugeni; Dao, Maria-Carlota; Aron-Wisnewsky, Judith; Kontush, Anatol; Zucker, Jean-Daniel; Rizkalla, Salwa W; Dugail, Isabelle; Clément, Karine.

Metabolomics; 15(11): 140, 2019 10 11.

Artículo en Inglés | MEDLINE | ID: mdl-31605240

15.

Dietary intervention impact on gut microbial gene richness.

Cotillard, Aurélie; Kennedy, Sean P; Kong, Ling Chun; Prifti, Edi; Pons, Nicolas; Le Chatelier, Emmanuelle; Almeida, Mathieu; Quinquis, Benoit; Levenez, Florence; Galleron, Nathalie; Gougis, Sophie; Rizkalla, Salwa; Batto, Jean-Michel; Renault, Pierre; Doré, Joel; Zucker, Jean-Daniel; Clément, Karine; Ehrlich, Stanislav Dusko.

Nature; 500(7464): 585-8, 2013 Aug 29.

Artículo en Inglés | MEDLINE | ID: mdl-23985875

16.

Richness of human gut microbiome correlates with metabolic markers.

Le Chatelier, Emmanuelle; Nielsen, Trine; Qin, Junjie; Prifti, Edi; Hildebrand, Falk; Falony, Gwen; Almeida, Mathieu; Arumugam, Manimozhiyan; Batto, Jean-Michel; Kennedy, Sean; Leonard, Pierre; Li, Junhua; Burgdorf, Kristoffer; Grarup, Niels; Jørgensen, Torben; Brandslund, Ivan; Nielsen, Henrik Bjørn; Juncker, Agnieszka S; Bertalan, Marcelo; Levenez, Florence; Pons, Nicolas; Rasmussen, Simon; Sunagawa, Shinichi; Tap, Julien; Tims, Sebastian; Zoetendal, Erwin G; Brunak, Søren; Clément, Karine; Doré, Joël; Kleerebezem, Michiel; Kristiansen, Karsten; Renault, Pierre; Sicheritz-Ponten, Thomas; de Vos, Willem M; Zucker, Jean-Daniel; Raes, Jeroen; Hansen, Torben; Bork, Peer; Wang, Jun; Ehrlich, S Dusko; Pedersen, Oluf.

Nature; 500(7464): 541-6, 2013 Aug 29.

Artículo en Inglés | MEDLINE | ID: mdl-23985870

17.

Corrigendum: Disentangling type 2 diabetes and metformin treatment signatures in the human gut microbiota.

Forslund, Kristoffer; Hildebrand, Falk; Nielsen, Trine; Falony, Gwen; Le Chatelier, Emmanuelle; Sunagawa, Shinichi; Prifti, Edi; Vieira-Silva, Sara; Gudmundsdottir, Valborg; Pedersen, Helle Krogh; Arumugam, Manimozhiyan; Kristiansen, Karsten; Voigt, Anita Yvonne; Vestergaard, Henrik; Hercog, Rajna; Costea, Paul Igor; Kultima, Jens Roat; Li, Junhua; Jørgensen, Torben; Levenez, Florence; Dore, Joël; Nielsen, H Bjørn; Brunak, Søren; Raes, Jeroen; Hansen, Torben; Wang, Jun; Ehrlich, S Dusko; Bork, Peer; Pedersen, Oluf.

Nature; 545(7652): 116, 2017 05 03.

Artículo en Inglés | MEDLINE | ID: mdl-28470190

18.

Akkermansia muciniphila and improved metabolic health during a dietary intervention in obesity: relationship with gut microbiome richness and ecology.

Dao, Maria Carlota; Everard, Amandine; Aron-Wisnewsky, Judith; Sokolovska, Nataliya; Prifti, Edi; Verger, Eric O; Kayser, Brandon D; Levenez, Florence; Chilloux, Julien; Hoyles, Lesley; Dumas, Marc-Emmanuel; Rizkalla, Salwa W; Doré, Joel; Cani, Patrice D; Clément, Karine.

Gut; 65(3): 426-36, 2016 Mar.

Artículo en Inglés | MEDLINE | ID: mdl-26100928

19.

Spectral consensus strategy for accurate reconstruction of large biological networks.

Affeldt, Séverine; Sokolovska, Nataliya; Prifti, Edi; Zucker, Jean-Daniel.

BMC Bioinformatics; 17(Suppl 16): 493, 2016 Dec 13.

Artículo en Inglés | MEDLINE | ID: mdl-28105915

20.

Qin et al. reply.

Qin, Nan; Le Chatelier, Emmanuelle; Guo, Jing; Prifti, Edi; Li, Lanjuan; Ehrlich, S Dusko.

Nature; 525(7569): E2-3, 2015 Sep 17.

Artículo en Inglés | MEDLINE | ID: mdl-26381989

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